1. 国家自然科学基金“ZmAlba6提高农杆菌遗传转化效率的分子机理解析”，起止时间2024.1-2027.12，经费50万元，主持人。

2. 生物育种课题“玉米高产耐密植等优异种质创制”，起止时间2022.12-2025.12，经费150万元，主持人。

3. 横向课题“玉米转基因技术开发研究”，起止时间2022.2-2026.1，经费300万元，主持人

4. 国家自然科学基金“SMK11表观遗传调控玉米籽粒发育的分子机制”，起止时间2019.1-2022.12，经费60万元，主持人。

5. 转基因重大专项任务“玉米规模化转基因技术体系构建”，起止时间2011.1-2020.12，经费615万元，主持人。

6. 中国农科院所级统筹科研业务费“基于新型不育系的玉米杂交育种技术的建立”（S2018QY07），起止时间2018.1-2020.12，经费90万元，主持人。

7. 科技部973任务“玉米品质性状的全基因组遗传解析”，起止时间2014.1-2018.12，经费67万元，主持人。

8. 教育部留学人员基金“玉米锌指蛋白基因ZmSAP13的功能及作用机制研究”，起止时间2010.1-2010.10， 经费4万元，主持人。

9. 转基因重大专项子课题“抗病虫、抗除草剂转基因玉米新品种培育”，起止时间2011.1-2020.12，经费1000万元，参加，主要执行人。

1. Chen  QQ, Guo YM, Zhang J, Zheng NN, Wang J, Liu Y, Lu JW, Zhen SH, Du XM, Li L, Fu JJ, Wang GY, Gu RL*, Wang JH*, Liu YJ* (2023) RNA polymerase common subunit ZmRPABC5b is transcriptionally activated by Opaque2 and essential for endosperm development in maize. Nucleic Acids Research, 51:7832-7850.

2. Ren ZJ, Fan KJ, Zhen SH, Zhang J, Liu Y, Fu JJ, Qi QL, Wei QH, Du Y, Tatar W, Zhang XF, Wang GY, Rasmusson AG, Wang JH*, Liu YJ* (2023) Tetratricopeptide-containing SMALL KERNEL 11 is essential for the assembly of cytochrome c oxidase in maize mitochondria. Plant Physiology, 192:170-187.

3. Chen RR, Wei QH, Liu Y, Li JK, Du XM, Chen Y, Wang JH*, Liu YJ* (2023) The pentatricopeptide repeat protein EMP601 functions in maize seed development by affecting RNA editing of mitochondrial transcript ccmC. Crop Journal, 11:1368-1379.

4. Fan KJ, Fu QH, Wei QH, Jia SN, Zhao AQ, Wang TT, Cao J, Liu Y, Ren ZJ*, Liu YJ* (2022) ZmnMAT1, a nuclear-encoded type I maturase, is required for the splicing of mitochondrial Nad1 intron 1 and Nad4 intron 2 . Frontiers in Plant Science, 13:1033869.

5. Fan KJ, Ren ZJ, Zhang XF, Liu Y, Fu JJ, Qi CL, Tatar W, Rasmusson AG*, Wang GY*, Liu YJ* (2021) The pentatricopeptide repeat protein EMP603 is required for the splicing of mitochondrial Nad1 intron 2 and seed development in maize. Journal of Experimental Botany, 72: 6933–6948.

6. Xu QL, Yang L, Kang D, Ren ZJ, Liu YJ*  (2021) Maize MS2 encodes an ATP-binding cassette transporter that is essential for anther development. The Crop Journal,9:1301–1308.

7. Zhang J, Zhang X, Chen R, Yang L, Fan K, LiuY, Wang G, Ren Z*, Liu YJ* (2020) Generationof transgene-free semidwarf maize plants by gene editing of gibberellin-oxidase20-3using CRISPR/Cas9. Frontiers in Plant Science 11: 1048.

8. Du XM, FangT, Liu Y, Wang M, Zang MS, Huang LY, Zhen SH, Zhang J, Shi ZC, Wang GY, Fu JJ*, Liu YJ* (2020) Global profiling of N6-methyladenosine methylation in maize callusinduction. Plant Genome e20018

9. Du XM, FangT, Liu Y, Huang LY, Wang XL, Zhang J, Cui YB, Zang MS, Wang GY, Fu JJ*, Liu YJ* (2020) Global profiling of alternative splicing in callusinduction of immature maize embryo. InVitro Cell Dev Bioy –Plant，56:159–168

10. Ren Z, Fan K, Fang T, Zhang J,Yang L, Wang J, Wang G*, Liu YJ* (2019) Maize Empty pericarp602 encodes a P-type PPR protein thatis essential for seed development. Plant Cell Physiology 60(8): 1734-1746.

11. Du X, Fang T, Liu Y, Huang L, Zang M, Wang G,Liu YJ*, Fu J* (2019) Transcriptome profiling predicts new genes to promote maize callus formationand transformation. Frontiers in Plant Science 10: 1633.

12. Chen R, Xu Q, Liu Y, Zhang J, Ren D, Wang G, LiuYJ* (2018) Generation of transgene-free maize male sterile lines usingthe CRISPR/Cas9 system. Frontiers in Plant Science 9: 1180.

13. Liu Y, Zhang Z, Fu J, Wang G, Wang J, LiuYJ * (2017) Transcriptome analysis of maize immature embryos revealsthe roles of cysteine in improving Agrobacterium infection efficiency. Frontiersin Plant Science  8: 1778.

14. Kang D, Wang CY, Xu QL, Wang GY, LiuYJ* (2017) Characterization of maize malesterile2 mutant by phenotypic and RNA sequencing analyses. Plant Breeding.  136:319-330.

15. Cao Z, Zhang W, Ning X, Wang B*, Liu YJ*, Li QX* (2017) Development of monoclonal antibodies recognizing linear epitope:Illustration by three Bacillusthuringiensis crystal proteins of genetically modified cotton, maize, and tobacco.Journal of Agricultural and Food Chemistry 65(46): 10115-10122.

16. LiuYJ, Zhang YW, Liu Y, Lu W, Wang GY (2015)Metabolic effects of glyphosate on transgenic maize expressing a G2-EPSPS gene from Pseudomonasfluorescens. Journal of Plant BiochemistryBiotechnology，24:233-241.

17. Liu YJ#, Cao GY#, Chen RR, ZhangSX, Ren Y, Lu W, Wang JH, Wang GY (2015) Transgenic tobacco simultaneously overexpressing glyphosateacetyltransferase and 5-enolpyruv-ylshikimate-3-phosphate synthase are moreresistant to glyphosate than those containing one gene. Transgenic Research. 24:753-763.

18. Ren ZJ, Cao GY, Zhang YW, Liu Y, LiuYJ* (2015) Overexpression of a modified AM79aroA gene in transgenic maize confers high tolerance to glyphosate. Journal of Integrative Agriculture, 14:414-422

19. Ren ZJ, Liu Y, Kang D, Fan KJ, Wang CY, Wang GY, Liu YJ (2015) Two alternative splicing variants of maize HKT1;1confer salt tolerance in transgenic tobacco plants Plant Cell Tissue Organ Culture, 123:569-578.

20. Yuan Y, Qi LJ, Yang J, Wu C, LiuYJ*, Huang LQ* (2015) A Scutellaria baicalensis R2R3-MYB gene, SbMYB8,regulates flavonoid biosynthesis and improves drought stress tolerance intransgenic tobacco. Plant Cell TissueOrgan Culture , 120:961-972.

21. Zhang YW, Liu Y, Zhang J, Wang GY, WangJH, Liu YJ* (2015) Assessmentof transgene copy number and zygosity of transgenic maize overexpressing Cry1Iegene with SYBR® Green qRT-PCR. In VitroCellular and Developmental Biology–Plant, 51:125 -134

22.Zhang YW#,Liu YJ#, Ren Y, Liu Y,Liang GM, Song FP, Bai SX, Wang JH, Wang GY (2013) Overexpression of a novel Cry1Ie gene confers resistance toCry1Ac-resistant cotton bollworm in transgenic lines of maize. Plant Cell Tissue Organ Culture, 115:151-158.

23.Zhang SX,Lian Y, Liu Y, Wang XQ，LiuYJ*,Wang GY* (2013) Characterization of a maizewip1 promoter in transgenic plants. InternationalJournal of Molecular Sciences, 14:23872-23892.

24.Yuan Y, Wu C,Liu YJ*, Yang J, Huang LQ* (2013) The Scutellariabaicalensis R2R3 MYB transcription factors modulates flavonoid biosynthesisby regulating GA metabolism in transgenic tobacco plants. PLoS ONE，8：e77275.

25.Liu YJ, Yuan Y, Liu YY, Liu Y, Fu JJ,Zheng J, Wang GY (2012) Gene families of maizeglutathione–ascorbate redox cycle respond differently to abiotic stresses Journal of Plant Physiology, 169:183-192.

26. Cao GY#, Liu YJ#, Zhang SX, Yang XW, Chen RR,Zhang YW, Lu W, Wang JH, Lin M, Wang GY (2012) A novel 5-nolpyruvylshikimate -3-phosphate synthase shows high glyphosatetolerance in Escherichia coli and tobacco plants.  PLoS ONE,7：e38718.

27. Yuan Y#, Liu YJ#, Wu C, Chen S, Wang ZY, Yang ZC, Qin SS,Huang LQ (2012) Water deficit affected flavonoid accumulation byregulating hormone metabolism in Scutellaria baicalensis Georgi roots. PLoS ONE，7:e42946.

28. Liu YJ, Nunes-Nesi A,Wallstrom SV, Lager I, Michalecka AM, Norberg FE, Widell S, Fredlund KM, FernieAR, Rasmusson AG (2009) A redox-mediated modulation of stem boltingin transgenic Nicotiana sylvestris differentially expressing the external mitochondrialNADPH dehydrogenase. Plant Physiology,150:1248-1259.

授权专利

1. 刘允军，刘艳，王国英，任珍静，陈岩，施建琴. 一种转基因玉米VB15外源插入片段的旁侧序列及其应用 （专利号 ZL202311302047.9）

2. 刘允军,王国英,刘艳. 一种抗虫转基因玉米AM63插入位点的外源插入片段的旁侧序列及其应用 （专利号 ZL202110401503.X）

3. 刘允军，刘艳，王国英. 玉米BBM1基因在提高植物遗传转化效率中的应用 （专利号 201910411582.6）

4. 刘允军,王国英,刘艳.一种农杆菌侵染玉米幼胚的方法(专利号201310022133.4)

5.刘允军,王国英,刘艳.一种通过弱光培养体系快速获得转基因植物的方法 (专利号201710090814.2)

6.刘允军,王国英,张煜文,刘艳. 融合杀虫蛋白Cry1Am、其编码基因及应用(专利号201510175515.X)

7.刘允军,张煜文,王国英,何康来.一种杀虫蛋白及其编码基因与应用( 专利号201410591794.3)

8.刘允军,任珍静,王国英. 一种玉米耐盐基因及其应用 (专利号201410838479.6)